Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Gm15165-201ENSMUST00000118140 502 ntBASIC19.5■□□□□ 0.71
Col20a1Q923P0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.5■□□□□ 0.71
Col20a1Q923P0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col20a1Q923P0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Mir8098-201ENSMUST00000184011 137 ntBASIC19.49■□□□□ 0.71
Col20a1Q923P0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.49■□□□□ 0.71
Col20a1Q923P0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.49■□□□□ 0.71
Col20a1Q923P0 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.49■□□□□ 0.71
Col20a1Q923P0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.48■□□□□ 0.71
Col20a1Q923P0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.48■□□□□ 0.71
Col20a1Q923P0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col20a1Q923P0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Gm36967-201ENSMUST00000193814 266 ntBASIC19.47■□□□□ 0.71
Col20a1Q923P0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col20a1Q923P0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.46■□□□□ 0.71
Col20a1Q923P0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col20a1Q923P0 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.46■□□□□ 0.71
Col20a1Q923P0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col20a1Q923P0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.45■□□□□ 0.7
Col20a1Q923P0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.45■□□□□ 0.7
Col20a1Q923P0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Gm27867-201ENSMUST00000184778 125 ntBASIC19.45■□□□□ 0.7
Col20a1Q923P0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col20a1Q923P0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms