Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb1Q91Y08 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb1Q91Y08 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Gm18421-201ENSMUST00000204122 625 ntBASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb1Q91Y08 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Gm7977-201ENSMUST00000193787 748 ntBASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb1Q91Y08 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb1Q91Y08 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Gm29707-201ENSMUST00000196325 491 ntBASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb1Q91Y08 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb1Q91Y08 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms