Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Gm14126-201ENSMUST00000122345 395 ntBASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Gm18595-201ENSMUST00000175736 1068 ntBASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb20Q91XZ9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Gm44450-201ENSMUST00000199528 114 ntBASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Gm45328-201ENSMUST00000210942 917 ntBASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb20Q91XZ9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Gm15074-201ENSMUST00000117603 936 ntBASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Gm12467-201ENSMUST00000117625 745 ntBASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Gm7284-201ENSMUST00000131667 944 ntBASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhb20Q91XZ9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb20Q91XZ9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb20Q91XZ9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms