Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb22Q91XZ8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Gm11950-201ENSMUST00000121615 838 ntBASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb22Q91XZ8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Gm17808-201ENSMUST00000200859 894 ntBASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb22Q91XZ8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb22Q91XZ8 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Gm36967-201ENSMUST00000193814 266 ntBASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhb22Q91XZ8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhb22Q91XZ8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhb22Q91XZ8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb22Q91XZ8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb22Q91XZ8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms