Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb3Q91XZ7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Gm11927-201ENSMUST00000118472 759 ntBASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Gm13158-201ENSMUST00000122007 736 ntBASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Mir8112-201ENSMUST00000184382 131 ntBASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Gm38285-201ENSMUST00000192928 922 ntBASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb3Q91XZ7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb3Q91XZ7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb3Q91XZ7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Gm6576-201ENSMUST00000169678 883 ntBASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb3Q91XZ7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb3Q91XZ7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms