Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb4Q91XZ6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Gm3375-201ENSMUST00000203929 796 ntBASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb4Q91XZ6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb4Q91XZ6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb4Q91XZ6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Gm21814-202ENSMUST00000203277 873 ntBASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb4Q91XZ6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb4Q91XZ6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb4Q91XZ6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Pcdhb4Q91XZ6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb4Q91XZ6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb4Q91XZ6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms