Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Gm13216-201ENSMUST00000117145 591 ntBASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga9Q91XX9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhga9Q91XX9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Gm9103-201ENSMUST00000119371 405 ntBASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Ank2-226ENSMUST00000189368 339 ntBASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga9Q91XX9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Gm27741-201ENSMUST00000185060 237 ntBASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga9Q91XX9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhga9Q91XX9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga9Q91XX9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga9Q91XX9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga9Q91XX9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.33■□□□□ 0.21
Pcdhga9Q91XX9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga9Q91XX9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms