Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhgc3Q91XX1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgc3Q91XX1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Gm6576-201ENSMUST00000169678 883 ntBASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgc3Q91XX1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Mir6349-201ENSMUST00000184059 97 ntBASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Prob1-201ENSMUST00000097619 3021 ntBASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgc3Q91XX1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms