Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgc5Q91XW9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgc5Q91XW9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhgc5Q91XW9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgc5Q91XW9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Gm27525-201ENSMUST00000184465 107 ntBASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgc5Q91XW9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhgc5Q91XW9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgc5Q91XW9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgc5Q91XW9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgc5Q91XW9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgc5Q91XW9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms