Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trex1Q91XB0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.91■□□□□ 0.62
Trex1Q91XB0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.91■□□□□ 0.62
Trex1Q91XB0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.91■□□□□ 0.62
Trex1Q91XB0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.91■□□□□ 0.62
Trex1Q91XB0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trex1Q91XB0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.9■□□□□ 0.62
Trex1Q91XB0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trex1Q91XB0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trex1Q91XB0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Trex1Q91XB0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Mir5131-201ENSMUST00000175426 93 ntBASIC18.89■□□□□ 0.61
Trex1Q91XB0 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.89■□□□□ 0.61
Trex1Q91XB0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trex1Q91XB0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.88■□□□□ 0.61
Trex1Q91XB0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.88■□□□□ 0.61
Trex1Q91XB0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Gm27525-201ENSMUST00000184465 107 ntBASIC18.88■□□□□ 0.61
Trex1Q91XB0 Gm7506-201ENSMUST00000207758 815 ntBASIC18.88■□□□□ 0.61
Trex1Q91XB0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.88■□□□□ 0.61
Trex1Q91XB0 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.88■□□□□ 0.61
Trex1Q91XB0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trex1Q91XB0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms