Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp25Q8VIK1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Snrnp25Q8VIK1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snrnp25Q8VIK1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snrnp25Q8VIK1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snrnp25Q8VIK1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.33■□□□□ 0.37
Snrnp25Q8VIK1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Snrnp25Q8VIK1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snrnp25Q8VIK1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snrnp25Q8VIK1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Gm33142-201ENSMUST00000193913 867 ntBASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snrnp25Q8VIK1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snrnp25Q8VIK1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms