Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cdhr1Q8VHP6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr1Q8VHP6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Birc2-201ENSMUST00000054878 378 ntBASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr1Q8VHP6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cdhr1Q8VHP6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr1Q8VHP6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms