Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa1Q8VEE4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rpa1Q8VEE4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rpa1Q8VEE4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Mir5133-201ENSMUST00000174955 77 ntBASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa1Q8VEE4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Gm5408-201ENSMUST00000197998 747 ntBASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa1Q8VEE4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa1Q8VEE4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms