Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lmcd1Q8VEE1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Mir6956-201ENSMUST00000183598 62 ntBASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.59■□□□□ 0.41
Lmcd1Q8VEE1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lmcd1Q8VEE1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lmcd1Q8VEE1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lmcd1Q8VEE1 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Gm4459-201ENSMUST00000118750 468 ntBASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lmcd1Q8VEE1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.57■□□□□ 0.4
Lmcd1Q8VEE1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lmcd1Q8VEE1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lmcd1Q8VEE1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms