Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Uhrf1Q8VDF2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.04■□□□□ 0.32
Uhrf1Q8VDF2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.04■□□□□ 0.32
Uhrf1Q8VDF2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Gm27702-201ENSMUST00000184512 56 ntBASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Uhrf1Q8VDF2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 AV026068-213ENSMUST00000223675 1171 ntBASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Uhrf1Q8VDF2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Uhrf1Q8VDF2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Uhrf1Q8VDF2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Uhrf1Q8VDF2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.02■□□□□ 0.31
Uhrf1Q8VDF2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Gm12497-201ENSMUST00000138778 237 ntBASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.01■□□□□ 0.31
Uhrf1Q8VDF2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Gm6550-201ENSMUST00000187574 993 ntBASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Gm6089-201ENSMUST00000197666 938 ntBASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Uhrf1Q8VDF2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Gm8097-201ENSMUST00000117903 829 ntBASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.99■□□□□ 0.31
Uhrf1Q8VDF2 Gm12260-201ENSMUST00000122447 411 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms