Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Gm11950-201ENSMUST00000121615 838 ntBASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3kbp1Q8R550 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Haglr-201ENSMUST00000100000 2085 ntBASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.05■□□□□ 0.32
Sh3kbp1Q8R550 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3kbp1Q8R550 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Mir770-201ENSMUST00000103252 94 ntBASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Gm37722-201ENSMUST00000193757 208 ntBASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3kbp1Q8R550 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Gm6623-201ENSMUST00000173570 544 ntBASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms