Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm9987-201ENSMUST00000069768 567 ntBASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
Top1mtQ8R4U6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Gm18421-201ENSMUST00000204122 625 ntBASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Top1mtQ8R4U6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Top1mtQ8R4U6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Top1mtQ8R4U6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Top1mtQ8R4U6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Top1mtQ8R4U6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Top1mtQ8R4U6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Top1mtQ8R4U6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Gm22697-201ENSMUST00000175194 63 ntBASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Top1mtQ8R4U6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms