Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.61■□□□□ 0.89
Abca3Q8R420 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca3Q8R420 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.6■□□□□ 0.89
Abca3Q8R420 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.6■□□□□ 0.89
Abca3Q8R420 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Abca3Q8R420 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca3Q8R420 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Gm13597-201ENSMUST00000121239 375 ntBASIC20.59■□□□□ 0.89
Abca3Q8R420 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.59■□□□□ 0.89
Abca3Q8R420 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Abca3Q8R420 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca3Q8R420 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.58■□□□□ 0.89
Abca3Q8R420 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.58■□□□□ 0.89
Abca3Q8R420 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abca3Q8R420 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca3Q8R420 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca3Q8R420 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Abca3Q8R420 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca3Q8R420 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Abca3Q8R420 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca3Q8R420 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca3Q8R420 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.57■□□□□ 0.88
Abca3Q8R420 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Mir6404-201ENSMUST00000183699 94 ntBASIC20.57■□□□□ 0.88
Abca3Q8R420 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.57■□□□□ 0.88
Abca3Q8R420 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.57■□□□□ 0.88
Abca3Q8R420 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Abca3Q8R420 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.57■□□□□ 0.88
Abca3Q8R420 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.57■□□□□ 0.88
Abca3Q8R420 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Abca3Q8R420 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Abca3Q8R420 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abca3Q8R420 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.56■□□□□ 0.88
Abca3Q8R420 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.56■□□□□ 0.88
Abca3Q8R420 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca3Q8R420 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.55■□□□□ 0.88
Abca3Q8R420 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca3Q8R420 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca3Q8R420 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca3Q8R420 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca3Q8R420 Rarb-207ENSMUST00000225921 2756 ntBASIC20.55■□□□□ 0.88
Abca3Q8R420 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca3Q8R420 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Abca3Q8R420 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Abca3Q8R420 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.54■□□□□ 0.88
Abca3Q8R420 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Abca3Q8R420 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abca3Q8R420 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abca3Q8R420 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abca3Q8R420 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.54■□□□□ 0.88
Abca3Q8R420 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Abca3Q8R420 Gm8655-201ENSMUST00000221159 852 ntBASIC20.54■□□□□ 0.88
Abca3Q8R420 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abca3Q8R420 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abca3Q8R420 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms