Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cuedc1Q8R3V6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cuedc1Q8R3V6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.04■□□□□ -0
Cuedc1Q8R3V6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cuedc1Q8R3V6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cuedc1Q8R3V6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cuedc1Q8R3V6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cuedc1Q8R3V6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cuedc1Q8R3V6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Mir770-201ENSMUST00000103252 94 ntBASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Mir8098-201ENSMUST00000184011 137 ntBASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cuedc1Q8R3V6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Gm37722-201ENSMUST00000193757 208 ntBASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 AC122351.1-201ENSMUST00000220467 126 ntBASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cuedc1Q8R3V6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cuedc1Q8R3V6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms