Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.78■□□□□ 0.28
Slf1Q8R3P9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.77■□□□□ 0.28
Slf1Q8R3P9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Gm4968-201ENSMUST00000071458 858 ntBASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slf1Q8R3P9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slf1Q8R3P9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slf1Q8R3P9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slf1Q8R3P9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slf1Q8R3P9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slf1Q8R3P9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms