Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r38Q8R2E1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Gm7638-201ENSMUST00000121348 967 ntBASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r38Q8R2E1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Gm10698-201ENSMUST00000182663 604 ntBASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.54■□□□□ 0.08
Vmn1r38Q8R2E1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r38Q8R2E1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Gm15378-201ENSMUST00000121894 207 ntBASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r38Q8R2E1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.52■□□□□ 0.07
Vmn1r38Q8R2E1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.52■□□□□ 0.07
Vmn1r38Q8R2E1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.52■□□□□ 0.07
Vmn1r38Q8R2E1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vmn1r38Q8R2E1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r38Q8R2E1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms