Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vopp1Q8R1C3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Gm4535-201ENSMUST00000182274 558 ntBASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Gm10355-201ENSMUST00000097146 517 ntBASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vopp1Q8R1C3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vopp1Q8R1C3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vopp1Q8R1C3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Gm8097-201ENSMUST00000117903 829 ntBASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Mir5126-201ENSMUST00000175513 77 ntBASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vopp1Q8R1C3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vopp1Q8R1C3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Gm12497-201ENSMUST00000138778 237 ntBASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Gm6089-201ENSMUST00000197666 938 ntBASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vopp1Q8R1C3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms