Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf7Q8R0S1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf7Q8R0S1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Gm29707-201ENSMUST00000196325 491 ntBASIC19.52■□□□□ 0.72
Atf7Q8R0S1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Atf7Q8R0S1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atf7Q8R0S1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Atf7Q8R0S1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Atf7Q8R0S1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atf7Q8R0S1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf7Q8R0S1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Gm27389-201ENSMUST00000183622 195 ntBASIC19.5■□□□□ 0.71
Atf7Q8R0S1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf7Q8R0S1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf7Q8R0S1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms