Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alms1Q8K4E0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.13■□□□□ 0.17
Alms1Q8K4E0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alms1Q8K4E0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Gm7230-201ENSMUST00000173026 815 ntBASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Alms1Q8K4E0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Alms1Q8K4E0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms