Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox30Q8CGW4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sox30Q8CGW4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox30Q8CGW4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sox30Q8CGW4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox30Q8CGW4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox30Q8CGW4 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.08■□□□□ 0.49
Sox30Q8CGW4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.08■□□□□ 0.49
Sox30Q8CGW4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Gm21814-202ENSMUST00000203277 873 ntBASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox30Q8CGW4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.07■□□□□ 0.48
Sox30Q8CGW4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Prob1-201ENSMUST00000097619 3021 ntBASIC18.07■□□□□ 0.48
Sox30Q8CGW4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Gm18421-201ENSMUST00000204122 625 ntBASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms