Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab43Q8CG50 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab43Q8CG50 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.09■□□□□ 0.17
Rab43Q8CG50 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Gm27867-201ENSMUST00000184778 125 ntBASIC16.09■□□□□ 0.17
Rab43Q8CG50 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rab43Q8CG50 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab43Q8CG50 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab43Q8CG50 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab43Q8CG50 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rab43Q8CG50 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab43Q8CG50 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.08■□□□□ 0.16
Rab43Q8CG50 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.08■□□□□ 0.16
Rab43Q8CG50 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab43Q8CG50 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Gm6376-201ENSMUST00000209407 580 ntBASIC16.07■□□□□ 0.16
Rab43Q8CG50 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab43Q8CG50 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms