Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Rprl3-201ENSMUST00000157400 290 ntBASIC20.37■□□□□ 0.85
Smc4Q8CG47 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.37■□□□□ 0.85
Smc4Q8CG47 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.37■□□□□ 0.85
Smc4Q8CG47 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc4Q8CG47 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Gm13312-201ENSMUST00000119631 718 ntBASIC20.36■□□□□ 0.85
Smc4Q8CG47 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc4Q8CG47 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Gm12895-201ENSMUST00000122214 226 ntBASIC20.35■□□□□ 0.85
Smc4Q8CG47 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.35■□□□□ 0.85
Smc4Q8CG47 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.35■□□□□ 0.85
Smc4Q8CG47 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc4Q8CG47 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.34■□□□□ 0.85
Smc4Q8CG47 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Gm15372-201ENSMUST00000120729 834 ntBASIC20.34■□□□□ 0.85
Smc4Q8CG47 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc4Q8CG47 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.33■□□□□ 0.85
Smc4Q8CG47 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.33■□□□□ 0.85
Smc4Q8CG47 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.33■□□□□ 0.85
Smc4Q8CG47 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Smc4Q8CG47 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc4Q8CG47 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.33■□□□□ 0.84
Smc4Q8CG47 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc4Q8CG47 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Smc4Q8CG47 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc4Q8CG47 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc4Q8CG47 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc4Q8CG47 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.32■□□□□ 0.84
Smc4Q8CG47 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms