Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28aQ8CEI3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28aQ8CEI3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Gm12441-201ENSMUST00000121806 588 ntBASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Il3ra-202ENSMUST00000223589 738 ntBASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28aQ8CEI3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Ccdc28aQ8CEI3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc28aQ8CEI3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Ccdc28aQ8CEI3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Gm15378-201ENSMUST00000121894 207 ntBASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28aQ8CEI3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc28aQ8CEI3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc28aQ8CEI3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc28aQ8CEI3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc28aQ8CEI3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc28aQ8CEI3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms