Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Gm7370-201ENSMUST00000219471 767 ntBASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Il3ra-202ENSMUST00000223589 738 ntBASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup88Q8CEC0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup88Q8CEC0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup88Q8CEC0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Mir1668-201ENSMUST00000184114 107 ntBASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Gm37025-201ENSMUST00000195159 829 ntBASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Dancr-204ENSMUST00000132389 2347 ntBASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup88Q8CEC0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Gm9731-201ENSMUST00000209480 747 ntBASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.47■□□□□ 0.71
Nup88Q8CEC0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup88Q8CEC0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.46■□□□□ 0.71
Nup88Q8CEC0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup88Q8CEC0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup88Q8CEC0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms