Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rsph6aQ8CDR2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rsph6aQ8CDR2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rsph6aQ8CDR2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rsph6aQ8CDR2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Gm19891-201ENSMUST00000189771 303 ntBASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Gm6296-201ENSMUST00000222599 943 ntBASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rsph6aQ8CDR2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.45■■□□□ 1.03
Rsph6aQ8CDR2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.45■■□□□ 1.02
Rsph6aQ8CDR2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rsph6aQ8CDR2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rsph6aQ8CDR2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms