Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtp1Q8C8C1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtp1Q8C8C1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtp1Q8C8C1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtp1Q8C8C1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtp1Q8C8C1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtp1Q8C8C1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtp1Q8C8C1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.83■□□□□ 0.6
Rtp1Q8C8C1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtp1Q8C8C1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.81■□□□□ 0.6
Rtp1Q8C8C1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rtp1Q8C8C1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtp1Q8C8C1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms