Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col6a6Q8C6K9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Gm12260-201ENSMUST00000122447 411 ntBASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Gm10175-201ENSMUST00000086013 645 ntBASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a6Q8C6K9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Gm24513-201ENSMUST00000174964 138 ntBASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col6a6Q8C6K9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Gm7063-201ENSMUST00000186840 981 ntBASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a6Q8C6K9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Gm25990-201ENSMUST00000102440 86 ntBASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms