Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Gm9987-201ENSMUST00000069768 567 ntBASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf3Q8C120 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Gm13474-201ENSMUST00000122466 815 ntBASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf3Q8C120 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf3Q8C120 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sh3rf3Q8C120 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3rf3Q8C120 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf3Q8C120 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms