Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nek11Q8C0Q4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 AA414768-201ENSMUST00000121924 1257 ntBASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Gm25016-201ENSMUST00000158399 131 ntBASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.61■□□□□ 0.73
Nek11Q8C0Q4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek11Q8C0Q4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nek11Q8C0Q4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nek11Q8C0Q4 Gm6623-201ENSMUST00000173570 544 ntBASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nek11Q8C0Q4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nek11Q8C0Q4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nek11Q8C0Q4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nek11Q8C0Q4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nek11Q8C0Q4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nek11Q8C0Q4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nek11Q8C0Q4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms