Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm5864-201ENSMUST00000202263 970 ntBASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf2Q8BZT2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Mzt1-203ENSMUST00000227948 952 ntBASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf2Q8BZT2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf2Q8BZT2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Gm12644-201ENSMUST00000119935 606 ntBASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Mir8098-201ENSMUST00000184011 137 ntBASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sh3rf2Q8BZT2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Sh3rf2Q8BZT2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Gm13884-201ENSMUST00000118103 829 ntBASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.7■□□□□ 0.26
Sh3rf2Q8BZT2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms