Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Il3ra-202ENSMUST00000223589 738 ntBASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cpne3Q8BT60 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gm715-201ENSMUST00000117865 831 ntBASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gm7791-201ENSMUST00000219066 539 ntBASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gm10812-201ENSMUST00000099864 546 ntBASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpne3Q8BT60 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpne3Q8BT60 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cpne3Q8BT60 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms