Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Ank2-226ENSMUST00000189368 339 ntBASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Gm10819-201ENSMUST00000099988 561 ntBASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chrnb3Q8BMN3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrnb3Q8BMN3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chrnb3Q8BMN3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Chrnb3Q8BMN3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chrnb3Q8BMN3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrnb3Q8BMN3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrnb3Q8BMN3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms