Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap4Q8BMK4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Gm24841-201ENSMUST00000158676 357 ntBASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.67■□□□□ 0.1
Ckap4Q8BMK4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap4Q8BMK4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Gm37025-201ENSMUST00000195159 829 ntBASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Timm23-208ENSMUST00000226683 750 ntBASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ckap4Q8BMK4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Ckap4Q8BMK4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap4Q8BMK4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms