Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Gm26308-201ENSMUST00000157768 69 ntBASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Mir3113-201ENSMUST00000175478 76 ntBASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col16a1Q8BLX7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col16a1Q8BLX7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Col16a1Q8BLX7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col16a1Q8BLX7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col16a1Q8BLX7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col16a1Q8BLX7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col16a1Q8BLX7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Gm5682-201ENSMUST00000173402 505 ntBASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Gm8655-201ENSMUST00000221159 852 ntBASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col16a1Q8BLX7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Mir8117-201ENSMUST00000184773 107 ntBASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col16a1Q8BLX7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Gm44945-201ENSMUST00000206764 1187 ntBASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col16a1Q8BLX7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col16a1Q8BLX7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col16a1Q8BLX7 Gm11764-201ENSMUST00000120221 623 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms