Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp1Q8BJQ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp1Q8BJQ2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Gm13312-201ENSMUST00000119631 718 ntBASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp1Q8BJQ2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp1Q8BJQ2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Usp1Q8BJQ2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp1Q8BJQ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp1Q8BJQ2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Gm10052-201ENSMUST00000168019 960 ntBASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Gm7729-201ENSMUST00000050143 801 ntBASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp1Q8BJQ2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp1Q8BJQ2 Gm43514-201ENSMUST00000198852 424 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms