Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chmp2bQ8BJF9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp2bQ8BJF9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.96■□□□□ 0.3
Chmp2bQ8BJF9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp2bQ8BJF9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp2bQ8BJF9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2bQ8BJF9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.94■□□□□ 0.3
Chmp2bQ8BJF9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms