Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc5a7Q8BGY9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Slc5a7Q8BGY9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Gm10493-201ENSMUST00000097270 612 ntBASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slc5a7Q8BGY9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.53□□□□□ -0.08
Slc5a7Q8BGY9 Gm10033-202ENSMUST00000211874 928 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms