Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.31■□□□□ 0.2
Ubp1Q811S7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubp1Q811S7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Gm11336-201ENSMUST00000118168 334 ntBASIC16.3■□□□□ 0.2
Ubp1Q811S7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Gm23634-201ENSMUST00000175071 91 ntBASIC16.3■□□□□ 0.2
Ubp1Q811S7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.3■□□□□ 0.2
Ubp1Q811S7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ubp1Q811S7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.29■□□□□ 0.2
Ubp1Q811S7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Gm11355-201ENSMUST00000121120 306 ntBASIC16.29■□□□□ 0.2
Ubp1Q811S7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ubp1Q811S7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.28■□□□□ 0.2
Ubp1Q811S7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ubp1Q811S7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ubp1Q811S7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ubp1Q811S7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.27■□□□□ 0.2
Ubp1Q811S7 Gm37722-201ENSMUST00000193757 208 ntBASIC16.27■□□□□ 0.2
Ubp1Q811S7 Gm7977-201ENSMUST00000193787 748 ntBASIC16.27■□□□□ 0.2
Ubp1Q811S7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.27■□□□□ 0.2
Ubp1Q811S7 Gm18115-201ENSMUST00000221209 621 ntBASIC16.27■□□□□ 0.2
Ubp1Q811S7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms