Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vrk1Q80X41 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.75■□□□□ 0.11
Vrk1Q80X41 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.75■□□□□ 0.11
Vrk1Q80X41 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vrk1Q80X41 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.74■□□□□ 0.11
Vrk1Q80X41 Gm13312-201ENSMUST00000119631 718 ntBASIC15.74■□□□□ 0.11
Vrk1Q80X41 Gm12644-201ENSMUST00000119935 606 ntBASIC15.74■□□□□ 0.11
Vrk1Q80X41 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.74■□□□□ 0.11
Vrk1Q80X41 Rprl3-201ENSMUST00000157400 290 ntBASIC15.74■□□□□ 0.11
Vrk1Q80X41 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vrk1Q80X41 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vrk1Q80X41 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vrk1Q80X41 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.71■□□□□ 0.11
Vrk1Q80X41 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms