Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx4Q7TNK1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.93■□□□□ 0.14
Rfx4Q7TNK1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Gm26571-201ENSMUST00000181399 666 ntBASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx4Q7TNK1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Gm17661-201ENSMUST00000170317 270 ntBASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Gm4968-201ENSMUST00000071458 858 ntBASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx4Q7TNK1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms