Protein–RNA interactions for Protein: Q78IS1

Tmed3, Transmembrane emp24 domain-containing protein 3, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed3Q78IS1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tmed3Q78IS1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tmed3Q78IS1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tmed3Q78IS1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tmed3Q78IS1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tmed3Q78IS1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tmed3Q78IS1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms