Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Gm25925-201ENSMUST00000158314 306 ntBASIC17.12■□□□□ 0.33
Cspg5Q71M36 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg5Q71M36 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 AW822252-206ENSMUST00000208904 237 ntBASIC17.11■□□□□ 0.33
Cspg5Q71M36 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.11■□□□□ 0.33
Cspg5Q71M36 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg5Q71M36 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Gm8969-201ENSMUST00000199694 526 ntBASIC17.1■□□□□ 0.33
Cspg5Q71M36 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.1■□□□□ 0.33
Cspg5Q71M36 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.1■□□□□ 0.33
Cspg5Q71M36 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.09■□□□□ 0.33
Cspg5Q71M36 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg5Q71M36 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
Cspg5Q71M36 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms