Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Casc1Q6TDU8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Casc1Q6TDU8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Casc1Q6TDU8 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Gm6433-201ENSMUST00000118634 875 ntBASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Gm27463-201ENSMUST00000183569 57 ntBASIC19.76■□□□□ 0.75
Casc1Q6TDU8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Casc1Q6TDU8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Gm7638-201ENSMUST00000121348 967 ntBASIC19.75■□□□□ 0.75
Casc1Q6TDU8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Casc1Q6TDU8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Gm9987-201ENSMUST00000069768 567 ntBASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casc1Q6TDU8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.74■□□□□ 0.75
Casc1Q6TDU8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casc1Q6TDU8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms