Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Gm12644-201ENSMUST00000119935 606 ntBASIC20.42■□□□□ 0.86
Ddx58Q6Q899 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx58Q6Q899 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Gm15165-201ENSMUST00000118140 502 ntBASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Gm36967-201ENSMUST00000193814 266 ntBASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx58Q6Q899 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Gm28659-201ENSMUST00000188013 759 ntBASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ddx58Q6Q899 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ddx58Q6Q899 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx58Q6Q899 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Ddx58Q6Q899 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx58Q6Q899 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx58Q6Q899 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ddx58Q6Q899 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx58Q6Q899 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Gm27867-201ENSMUST00000184778 125 ntBASIC20.38■□□□□ 0.85
Ddx58Q6Q899 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.38■□□□□ 0.85
Ddx58Q6Q899 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.38■□□□□ 0.85
Ddx58Q6Q899 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms