Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.9□□□□□ -0.18
Rif1Q6PR54 Gm7506-201ENSMUST00000207758 815 ntBASIC13.9□□□□□ -0.18
Rif1Q6PR54 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rif1Q6PR54 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rif1Q6PR54 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rif1Q6PR54 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.89□□□□□ -0.19
Rif1Q6PR54 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.89□□□□□ -0.19
Rif1Q6PR54 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.89□□□□□ -0.19
Rif1Q6PR54 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rif1Q6PR54 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Notumos-201ENSMUST00000151998 2659 ntBASIC13.88□□□□□ -0.19
Rif1Q6PR54 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rif1Q6PR54 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.87□□□□□ -0.19
Rif1Q6PR54 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm27622-201ENSMUST00000183779 60 ntBASIC13.87□□□□□ -0.19
Rif1Q6PR54 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.87□□□□□ -0.19
Rif1Q6PR54 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rif1Q6PR54 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.86□□□□□ -0.19
Rif1Q6PR54 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms